Machine Learning Classification of Augmented Raman Serum Spectra for Chronic Heart Failure Detection

Yulia A. Khristoforova orcid (Login required)
Samara National Research University, Russian Federation

Ekaterina O. Salnikova
Samara National Research University, Russian Federation

Irina A. Matveeva
Samara National Research University, Russian Federation


Paper #9555 received 18 Mar 2026; revised manuscript received 20 Apr 2026; accepted for publication 21 Apr 2026; published online 7 May 2026

DOI: 10.18287/JBPE26.12.020304

Abstract

In this work, we propose a promising non-invasive approach based on the Raman spectroscopy of human serum for chronic heart failure (CHF) diagnosis. Due to the limited sample size, which limits the performance of machine learning classifiers, this study explores data augmentation techniques to improve the classification of low- and high-grade CHF spectra using k-nearest neighbor (kNN) and partial least squares discriminant analysis (PLS-DA) algorithms. Raman spectra of 151 patients with CHF of the different stages were acquired at 532 nm excitation from serum samples collected at Samara City Clinical Hospital. Two augmentation approaches were systematically evaluated: (1) combined approach based on the linear spectral transformations (wavenumber shifting ±1–2 cm⁻¹, intensity stretching
0.9-1.1) and (2) Wasserstein Generative Adversarial Network (WGAN)-based synthetic spectrum generation, expanding training datasets 10-fold while preserving physiochemical realism. Augmentation based on linear spectral transformations yielded algorithm-specific results: kNN showed no significant receiver operating characteristic area under curve (ROC AUC) improvement (0.67 ± 0.11 original vs. 0.67–0.69 augmented), while PLS-DA achieved statistically significant gains (0.71 ± 0.11 vs. 0.80–0.81; z = 2.3–2.6, p < 0.05). WGAN augmentation proved superior across both methods, with k-NN reaching 0.74 ± 0.08 and PLS-DA achieving 0.83 ± 0.09. These findings establish WGAN as an optimal augmentation strategy for Raman-based CHF classification, achieving clinically relevant performance (ROC AUC > 0.80) from limited cohorts while enabling biomarker identification for cardiovascular diagnostics.

Keywords

Raman spectroscopy; chronic heart failure; data augmentation; kNN; PLS-DA; binary classification; WGAN

Full Text:

PDF

References


1. Cardiovascular diseases (CVDs), WHO, 31 July 2025 (accessed 2 March 2026) [https://www.who.int/news-room/fact-sheets/detail/ cardiovascular-diseases-(cvds)].

2. A. S. Galyavich, S. V. Nedogoda, G. P. Arutyunov, Yu. N. Belenkov, “About the classification of heart failure,” Russian Journal of Cardiology 28(9), 5584 (2023). [in Russian]

3. B. Bozkurt, A. J. S. Coats, H. Tsutsui, et al., “Universal definition and classification of heart failure: a report of the Heart Failure Society of America, Heart Failure Association of the European Society of Cardiology, Japanese Heart Failure Society and Writing Committee of the Universal Definition of Heart Failure: Endorsed by the Canadian Heart Failure Society, Heart Failure Association of India, Cardiac Society of Australia and New Zealand, and Chinese Heart Failure Association,” European Journal of Heart Failure 23(3), 352–380 (2021).

4. S. A. Hill, R. A. Booth, P. L. Santaguida, A. Don-Wauchope, J. A. Brown, M. Oremus, U. Ali, A. Bustamam, N. Sohel, R. McKelvie, C. Balion, and P. Raina, “Use of BNP and NT-proBNP for the diagnosis of heart failure in the emergency department: a systematic review of the evidence,” Heart Failure Reviews 19(4), 421–438 (2014).

5. T. A. McDonagh, M. Metra, M. Adamo, et al., “2023 Focused Update of the 2021 ESC Guidelines for the diagnosis and treatment of acute and chronic heart failure: Developed by the task force for the diagnosis and treatment of acute and chronic heart failure of the European Society of Cardiology (ESC) With the special contribution of the Heart Failure Association (HFA) of the ESC,” European Heart Journal 44(37), 3627–3639 (2023).

6. Y. Khristoforova, L. Bratchenko, and I. Bratchenko, “Raman-Based Techniques in Medical Applications for Diagnostic Tasks: A Review,” International Journal of Molecular Sciences 24(21), 15605 (2023).

7. L. A. Bratchenko, Y. A. Khristoforova, Y. G. Loginova, A. A. Moryatov, V. P. Zakharov, O. I. Kaganov, and I. A. Bratchenko, “Raman in Vivo Analysis of Melanoma Invasion Level,” Journal of Biomedical Photonics & Engineering 11(3), 030303 (2025).

8. L. A. Bratchenko, Y. A. Khristoforova, I. A. Pimenova, E. N. Tupikova, M. A. Skuratova, G. A. Dvoynikov-Sechnoy, S. Wang, P. A. Lebedev, and I. A. Bratchenko, “SERS-based technique for accessible and rapid diagnosis of multiple myeloma in blood serum analysis,” Light: Advanced Manufacturing, 6(2), 284–294 (2025).

9. H. Yilmaz, A. Ramoji, A. Winterfeld, H. Salehi, A. Ozkul, and J. Popp, “Applications of Raman Spectroscopy in Pandemic Virology: A Comprehensive Review,” ACS Photonics 13(6), 1568–1590 (2026).

10. D. W. Shipp, F. Sinjab, and I. Notingher, “Raman spectroscopy: techniques and applications in the life sciences,” Advances in Optics and Photonics 9(2), 315–428 (2017).

11. L. A. Bratchenko, Y. A. Khristoforova, I. A. Pimenova, M. S. Snegerev, V. I. Kupaev, P. A. Lebedev, Y. V. Kistenev, and I. A. Bratchenko, “Comparative Study Into the Effect of Detector Noises and Sensitivity on the Serum SERS Analysis: Example of Non-Communicable Diseases Discrimination,” Journal of Biophotonics 18(4), e202400475 (2025).

12. J. De Gelder, K. De Gussem, P. Vandenabeele, and L. Moens, “Reference database of Raman spectra of biological molecules,” Journal of Raman Spectroscopy 38(9), 1133–1147 (2007).

13. N. M. Ralbovsky, I. K. Lednev, “Towards development of a novel universal medical diagnostic method: Raman spectroscopy and machine learning,” Chemical Society Reviews 49(20), 7428–7453 (2020).

14. S. Jiang, X. Sha, S. Qu, Z. Jiang, Y. Shen, Q. Wang, M. Kang, and G. Fang, “Label-Free SERS spectroscopy of Serum: Early screening and therapeutic evaluation for ovarian tumor patients,” Microchemical Journal 215, 114180 (2025).

15. S. Ahmad, M. I. Majeed, H. Nawaz, M. R. Javed, N. Rashid, M. Abubakar, F. Batool, S. Bashir, M. Kashif, S. Ali, M. Tahira, S. Tabbasum, and I. Amin, “Characterization and prediction of viral loads of Hepatitis B serum samples by using surface-enhanced Raman spectroscopy (SERS),” Photodiagnosis and Photodynamic Therapy 35, 102386 (2021).

16. C. Beleites, U. Neugebauer, T. Bocklitz, C. Krafft, and J. Popp, “Sample size planning for classification models,” Analytica Chimica Acta 760, 25–33 (2013).

17. X. Zhang, H. Li, X. Tian, C. Chen, Y. Su, M. Li, J. Lv, C. Chen, and X. Lv, “Application of spectral small-sample data combined with a method of spectral data augmentation fusion (SDA-Fusion) in cancer diagnosis,” Chemometrics and Intelligent Laboratory Systems 231, 104681 (2022).

18. J. Zhao, H. Lui, S. Kalia, T. K. Lee, and H. Zeng, “Improving skin cancer detection by Raman spectroscopy using convolutional neural networks and data augmentation,” Frontiers in Oncology 14, 1320220 (2024).

19. M. Wu, S. Wang, S. Pan, A. C. Terentis, J. Strasswimmer, and X. Zhu, “Deep learning data augmentation for Raman spectroscopy cancer tissue classification,” Scientific Reports 11(1), 23842 (2021).

20. S. Laitrakun, S. Deepaisarn, S. Gulyanon, C. Srisumarnk, N. Chiewnawintawat, A. Angkoonsawaengsuk, and N. Jaikaew, “Toward Practical Augmentation of Raman Spectra for Deep Learning Classification of Contamination in HDD,” Journal of Information and Communication Convergence Engineering 21(3), 208–215 (2023).

21. D. Ma, L. Shang, J. Tang, Y. Bao, J. Fu, and J. Yin, “Classifying breast cancer tissue by Raman spectroscopy with one-dimensional convolutional neural network,” Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 256, 119732 (2021).

22. M. Patil, M. M. Patil, and S. Agrawal, “WGAN for Data Augmentation,” in GANs for Data Augmentation in Healthcare, A. Solanki, M. Naved (Eds.), Springer International Publishing, 223–241 (2023).

23. J. A. Hanley, B. J. McNeil, “A method of comparing the areas under receiver operating characteristic curves derived from the same cases,” Radiology 148(3), 839–843 (1983).

24. J. Udensi, J. Loughman, E. Loskutova, and H. J. Byrne, “Raman Spectroscopy of Carotenoid Compounds for Clinical Applications - A Review,” Molecules 27(24), 9017 (2022).






Сontact

34 Moskovskoe shosse, Samara, 443086, Russian Federation
Email: j-bpe@ssau.ru
Phone: +7-846-267-4550
© 2014-2025 J-BPE